Basic Information
Gene ID
Pop_G16G060928
Position
chrG16:7348346-7367242 (+)
18896bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Also AS Potri.016G080600AT3G55140Potri.016G080600.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G18G085941 pectinesterase
Pop_G17G031398 Polygalacturonase-like
Pop_G17G031399 Polygalacturonase-like
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003952 transcription factor
Pop_A01G004056 dnaJ homolog subfamily C member

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -