Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G17G021038
View in Genome Browser
Position
chrG17:4643942-4644683 (+)
741bp
Gene Type
gene
Gene Description (Protein Product)
Biogenesis of lysosome-related organelles complex 1 subunit
Organism
Populus alba x Populus glandulosa
Also AS Potri.017G106200AT5G49550Potri.017G106200.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_UnG035167 Sodium hydrogen exchanger
Pop_G19G084020 Sorting nexin
Pop_G17G025832 NADPH adrenodoxin oxidoreductase
Regulatory gene
Pop_A01G003954 Homeobox-leucine zipper protein
Pop_A01G004152 Homeobox-leucine zipper protein
Pop_A01G015498 Homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0031082 BLOC complex CC
GO:0031083 BLOC-1 complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044464 obsolete cell part CC
GO:0055114 obsolete oxidation-reduction process BP