PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Gene ID	Pop_G17G033122 View in Genome Browser
Position	chrG17:11412260-11429314 (-) 17054bp
Gene Type	gene
Gene Description (Protein Product)	helicase MAGATAMA
Organism	Populus alba x Populus glandulosa
Also AS	Potri.017G056700AT4G15570Potri.017G056700.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Pop_UnG092032 DNA-directed RNA polymerase Pop_G18G019113 116 kDa U5 small nuclear ribonucleoprotein Pop_G18G078342 Lariat debranching
Regulatory gene	Pop_A01G003796 isoform X1 Pop_A01G003952 transcription factor Pop_A01G004056 dnaJ homolog subfamily C member

Load All Networks

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0006935	chemotaxis	BP
GO:0007154	cell communication	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009553	embryo sac development	BP
GO:0009605	response to external stimulus	BP
GO:0009856	pollination	BP
GO:0009875	pollen-pistil interaction	BP
GO:0009987	cellular process	BP
GO:0010183	pollen tube guidance	BP
GO:0022414	reproductive process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0040011	locomotion	BP
GO:0042221	response to chemical	BP
GO:0042330	taxis	BP
GO:0044706	multi-multicellular organism process	BP
GO:0048229	gametophyte development	BP
GO:0048856	anatomical structure development	BP
GO:0048868	pollen tube development	BP
GO:0050896	response to stimulus	BP
GO:0050918	positive chemotaxis	BP
GO:0051704	obsolete multi-organism process	BP