Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G17G066976
View in Genome Browser
Position
chrG17:8277137-8281828 (+)
4691bp
Gene Type
gene
Gene Description (Protein Product)
prolyl 4-hydroxylase
Organism
Populus alba x Populus glandulosa
Also AS Potri.017G075100AT3G28490Potri.017G075100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G007609 4-coumarate-coa ligase
Regulatory gene
Pop_A01G056931 Dof zinc finger protein
Pop_A01G059879 Dof zinc finger protein
Pop_A02G012400 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004656 procollagen-proline 4-dioxygenase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005788 endoplasmic reticulum lumen CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009792 embryo development ending in birth or egg hatching BP
GO:0009987 cellular process BP
GO:0010171 body morphogenesis BP
GO:0010172 embryonic body morphogenesis BP
GO:0012505 endomembrane system CC
GO:0016491 oxidoreductase activity MF
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen MF
GO:0016706 2-oxoglutarate-dependent dioxygenase activity MF
GO:0018126 protein hydroxylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018208 peptidyl-proline modification BP
GO:0018996 molting cycle, collagen and cuticulin-based cuticle BP
GO:0019511 peptidyl-proline hydroxylation BP
GO:0019538 protein metabolic process BP
GO:0019798 procollagen-proline dioxygenase activity MF
GO:0031543 peptidyl-proline dioxygenase activity MF
GO:0031545 peptidyl-proline 4-dioxygenase activity MF
GO:0031974 membrane-enclosed lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0036211 protein modification process BP
GO:0040002 collagen and cuticulin-based cuticle development BP
GO:0040008 regulation of growth BP
GO:0040014 regulation of multicellular organism growth BP
GO:0040018 positive regulation of multicellular organism growth BP
GO:0042303 molting cycle BP
GO:0042335 cuticle development BP
GO:0042338 cuticle development involved in collagen and cuticulin-based cuticle molting cycle BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045927 positive regulation of growth BP
GO:0048518 positive regulation of biological process BP
GO:0048598 embryonic morphogenesis BP
GO:0048638 regulation of developmental growth BP
GO:0048639 positive regulation of developmental growth BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051094 positive regulation of developmental process BP
GO:0051213 dioxygenase activity MF
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -