Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G17G087010
View in Genome Browser
Position
chrG17:12624397-12627745 (+)
3348bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the NPH3 family
Organism
Populus alba x Populus glandulosa
Also AS Potri.017G048200AT5G64330Potri.017G048200.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_UnG025130 26S protease regulatory subunit 6B
Pop_UnG034284 26S protease regulatory subunit 6B
Pop_G19G084175 Belongs to the NPH3 family
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003952 transcription factor
Pop_A01G004012 Myb/SANT-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009638 phototropism BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016567 protein ubiquitination BP
GO:0019538 protein metabolic process BP
GO:0032446 protein modification by small protein conjugation BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:1901564 organonitrogen compound metabolic process BP