PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G18G085881 View in Genome Browser
Position	chrG18:7715011-7717995 (-) 2984bp
Gene Type	gene
Gene Description (Protein Product)	"component of the eukaryotic translation initiation factor 3 (eIF-3) complex
Organism	Populus alba x Populus glandulosa
Also AS	Potri.018G063600AT4G33250Potri.018G063600.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G19G009692 eukaryotic translation initiation factor Pop_UnG064911 40s ribosomal protein Pop_UnG035636 Belongs to the eukaryotic ribosomal protein eS8 family
Regulatory gene	Pop_A01G056931 Dof zinc finger protein Pop_A01G059879 Dof zinc finger protein Pop_A02G012400 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005852	eukaryotic translation initiation factor 3 complex	CC
GO:0032991	protein-containing complex	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC