Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G19G007619
View in Genome Browser
Position
chrG19:8243118-8245913 (-)
2795bp
Gene Type
gene
Gene Description (Protein Product)
Phosphoglucan phosphatase LSF2
Organism
Populus alba x Populus glandulosa
Also AS Potri.019G048600AT3G10940Potri.019G048600.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_UnG057610 Phosphoglucan phosphatase DSP4
Pop_UnG036883 Plant intracellular Ras-group-related LRR protein 5-like
Pop_UnG036884 Eyes absent homolog
Regulatory gene
Pop_A01G004206 Myb family transcription factor
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Pop_A01G010387 Myb family transcription factor APL

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000272 polysaccharide catabolic process BP
GO:0001871 obsolete pattern binding MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0005982 starch metabolic process BP
GO:0005983 starch catabolic process BP
GO:0006073 cellular glucan metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009251 glucan catabolic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0016052 carbohydrate catabolic process BP
GO:0016311 dephosphorylation BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0016791 phosphatase activity MF
GO:0019203 carbohydrate phosphatase activity MF
GO:0030246 carbohydrate binding MF
GO:0030247 polysaccharide binding MF
GO:0042578 phosphoric ester hydrolase activity MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044042 glucan metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044247 cellular polysaccharide catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044264 cellular polysaccharide metabolic process BP
GO:0044275 cellular carbohydrate catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046838 phosphorylated carbohydrate dephosphorylation BP
GO:0050308 sugar-phosphatase activity MF
GO:0071704 organic substance metabolic process BP
GO:1901575 organic substance catabolic process BP
GO:2001070 starch binding MF