Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G19G009288
View in Genome Browser
Position
chrG19:11196296-11196481 (+)
185bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the syntaxin family
Organism
Populus alba x Populus glandulosa
Also AS Potri.019G030800AT1G08560Potri.019G030800.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G009488 Belongs to the syntaxin family
Pop_UnG068412 SNAP25 homologous protein
Pop_G19G084179 60S ribosomal Protein
Regulatory gene
Pop_A01G003924 Zinc finger protein
Pop_A01G004096 transcriptional regulator
Pop_A01G004283 ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009504 cell plate CC
GO:0009506 plasmodesma CC
GO:0009524 phragmoplast CC
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022406 membrane docking BP
GO:0030054 cell junction CC
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046903 secretion BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0055044 symplast CC
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090174 organelle membrane fusion BP
GO:0098796 membrane protein complex CC
GO:0140056 organelle localization by membrane tethering BP
KEGG Term Name Description
map04130 SNARE interactions in vesicular transport -