Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G19G086381
View in Genome Browser
Position
chrG19:5056849-5061576 (+)
4727bp
Gene Type
gene
Gene Description (Protein Product)
RNA-binding protein
Organism
Populus alba x Populus glandulosa
Also AS Potri.019G068400AT1G33470Potri.019G068400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G090828 lipolytic acyl hydrolase (LAH)
Pop_UnG090836 lipolytic acyl hydrolase (LAH)
Regulatory gene
Pop_A01G003924 Zinc finger protein
Pop_A01G004096 transcriptional regulator
Pop_A01G004199 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000075 cell cycle checkpoint signaling BP
GO:0000077 DNA damage checkpoint signaling BP
GO:0000278 mitotic cell cycle BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0003730 mRNA 3'-UTR binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest BP
GO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator BP
GO:0007049 cell cycle BP
GO:0007050 regulation of cell cycle BP
GO:0007093 mitotic cell cycle checkpoint signaling BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008150 biological_process BP
GO:0008285 negative regulation of cell population proliferation BP
GO:0009892 negative regulation of metabolic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009895 negative regulation of catabolic process BP
GO:0009987 cellular process BP
GO:0010468 regulation of gene expression BP
GO:0010564 regulation of cell cycle process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010608 post-transcriptional regulation of gene expression BP
GO:0010628 positive regulation of gene expression BP
GO:0010948 negative regulation of cell cycle process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022402 cell cycle process BP
GO:0023052 signaling BP
GO:0030330 DNA damage response, signal transduction by p53 class mediator BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031330 negative regulation of cellular catabolic process BP
GO:0031570 DNA integrity checkpoint signaling BP
GO:0031571 mitotic G1 DNA damage checkpoint signaling BP
GO:0033554 cellular response to stress BP
GO:0035556 intracellular signal transduction BP
GO:0042127 regulation of cell population proliferation BP
GO:0042770 signal transduction in response to DNA damage BP
GO:0042772 DNA damage response, signal transduction resulting in transcription BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043484 regulation of RNA splicing BP
GO:0043487 regulation of RNA stability BP
GO:0043488 regulation of mRNA stability BP
GO:0043489 RNA stabilization BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044773 mitotic DNA damage checkpoint signaling BP
GO:0044774 mitotic DNA integrity checkpoint signaling BP
GO:0044783 mitotic G1 DNA damage checkpoint signaling BP
GO:0044819 mitotic G1/S transition checkpoint signaling BP
GO:0045786 negative regulation of cell cycle BP
GO:0045787 positive regulation of cell cycle BP
GO:0045930 negative regulation of mitotic cell cycle BP
GO:0045934 negative regulation of nucleobase-containing compound metabolic process BP
GO:0048255 mRNA stabilization BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051253 negative regulation of RNA metabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0051726 regulation of cell cycle BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061013 regulation of mRNA catabolic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070935 3'-UTR-mediated mRNA stabilization BP
GO:0071156 regulation of cell cycle BP
GO:0071158 regulation of cell cycle BP
GO:0072331 signal transduction by p53 class mediator BP
GO:0072395 cell cycle checkpoint signaling BP
GO:0072401 DNA integrity checkpoint signaling BP
GO:0072413 mitotic cell cycle checkpoint signaling BP
GO:0072422 DNA damage checkpoint signaling BP
GO:0072431 mitotic G1 DNA damage checkpoint signaling BP
GO:0080090 regulation of primary metabolic process BP
GO:0090068 positive regulation of cell cycle process BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901987 regulation of cell cycle phase transition BP
GO:1901988 negative regulation of cell cycle phase transition BP
GO:1901990 regulation of mitotic cell cycle phase transition BP
GO:1901991 negative regulation of mitotic cell cycle phase transition BP
GO:1902369 negative regulation of RNA catabolic process BP
GO:1902373 negative regulation of mRNA catabolic process BP
GO:1902400 mitotic G1 DNA damage checkpoint signaling BP
GO:1902402 mitotic DNA damage checkpoint signaling BP
GO:1902403 mitotic DNA integrity checkpoint signaling BP
GO:1902806 regulation of cell cycle G1/S phase transition BP
GO:1902807 negative regulation of cell cycle G1/S phase transition BP
GO:1903047 mitotic cell cycle process BP
GO:1903311 regulation of mRNA metabolic process BP
GO:1903312 negative regulation of mRNA metabolic process BP
GO:2000045 regulation of G1/S transition of mitotic cell cycle BP
GO:2000134 negative regulation of G1/S transition of mitotic cell cycle BP