Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_UnG010784
View in Genome Browser
Position
tig00000172_0_51079:2192-5283 (+)
3091bp
Gene Type
gene
Gene Description (Protein Product)
Prokaryotic RING finger family 4
Organism
Populus alba x Populus glandulosa
Also AS Potri.005G093000AT5G23110Potri.005G093000.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_UnG084951 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
Pop_UnG084952 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
Pop_UnG027429 DnaJ homolog subfamily C

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006457 protein folding BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0030424 axon CC
GO:0030425 dendrite CC
GO:0030544 Hsp70 protein binding MF
GO:0031072 heat shock protein binding MF
GO:0036477 somatodendritic compartment CC
GO:0042995 cell projection CC
GO:0043005 neuron projection CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044087 regulation of cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051087 chaperone binding MF
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0065007 biological regulation BP
GO:0070628 proteasome binding MF
GO:0070852 cell body fiber CC
GO:0090083 regulation of inclusion body assembly BP
GO:0090084 negative regulation of inclusion body assembly BP
GO:0097447 dendritic tree CC
GO:0097458 obsolete neuron part CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC