PPGR - Gene Detail

Basic Information

Gene ID	Pop_UnG029716 View in Genome Browser
Position	tig00000655_0_201269:181492-182835 (-) 1343bp
Gene Type	gene
Gene Description (Protein Product)	(NAC) domain-containing protein
Organism	Populus alba x Populus glandulosa
Also AS	Potri.015G127400AT1G12260Potri.015G127400.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Target gene

Pop_A01G000040 Reverse transcriptase (RNA-dependent DNA polymerase)

Pop_A01G002199 TruB family pseudouridylate synthase (N terminal domain)

Pop_A01G002200 quinone-oxidoreductase homolog, chloroplastic

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0006355	regulation of DNA-templated transcription	BP
GO:0008150	biological_process	BP
GO:0009888	tissue development	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010087	phloem or xylem histogenesis	BP
GO:0010089	xylem development	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0030154	cell differentiation	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032502	developmental process	BP
GO:0043565	sequence-specific DNA binding	MF
GO:0044087	regulation of cellular component biogenesis	BP
GO:0044089	positive regulation of cellular component biogenesis	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048759	xylem vessel member cell differentiation	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0140110	transcription regulator activity	MF
GO:1901348	positive regulation of secondary cell wall biogenesis	BP
GO:1901363	heterocyclic compound binding	MF
GO:1903338	regulation of cell wall organization or biogenesis	BP
GO:1903340	positive regulation of cell wall organization or biogenesis	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:1905177	tracheary element differentiation	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2000652	regulation of secondary cell wall biogenesis	BP
GO:2001141	regulation of RNA biosynthetic process	BP