Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B225067
Position
aalba5_s00036627:1775-2813 (+)
1038bp
Gene Type
gene
Gene Description (Protein Product)
cell division
Organism
Abies alba
Also AS AT1G61000

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B869882 attachment of mitotic spindle microtubules to kinetochore
Regulatory gene
AALBA5B001463 Myb family transcription factor APL
AALBA5B013896 lysine-specific demethylase
AALBA5B023305 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000070 mitotic sister chromatid segregation BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000228 nuclear chromosome CC
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000775 chromosome, centromeric region CC
GO:0000776 kinetochore CC
GO:0000777 kinetochore CC
GO:0000778 kinetochore CC
GO:0000779 condensed chromosome, centromeric region CC
GO:0000780 condensed chromosome, centromeric region CC
GO:0000793 condensed chromosome CC
GO:0000794 condensed nuclear chromosome CC
GO:0000819 sister chromatid segregation BP
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0005815 microtubule organizing center CC
GO:0005816 spindle pole body CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005876 spindle microtubule CC
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007020 microtubule nucleation BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007080 mitotic metaphase plate congression BP
GO:0007127 meiosis I BP
GO:0008150 biological_process BP
GO:0008608 attachment of spindle microtubules to kinetochore BP
GO:0009987 cellular process BP
GO:0015630 microtubule cytoskeleton CC
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0031109 microtubule polymerization or depolymerization BP
GO:0031262 Ndc80 complex CC
GO:0031617 kinetochore CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0034622 protein-containing complex assembly BP
GO:0035974 meiotic spindle pole body CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0045132 meiotic chromosome segregation BP
GO:0045143 homologous chromosome segregation BP
GO:0046785 microtubule polymerization BP
GO:0048285 organelle fission BP
GO:0050000 chromosome localization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051258 protein polymerization BP
GO:0051276 chromosome organization BP
GO:0051303 establishment of chromosome localization BP
GO:0051310 metaphase plate congression BP
GO:0051315 attachment of mitotic spindle microtubules to kinetochore BP
GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation BP
GO:0051321 meiotic cell cycle BP
GO:0051455 monopolar spindle attachment to meiosis I kinetochore BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051656 establishment of organelle localization BP
GO:0061982 meiosis I cell cycle process BP
GO:0065003 protein-containing complex assembly BP
GO:0070013 intracellular organelle lumen CC
GO:0071840 cellular component organization or biogenesis BP
GO:0097435 supramolecular fiber organization BP
GO:0098687 chromosomal region CC
GO:0098813 nuclear chromosome segregation BP
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0140013 meiotic nuclear division BP
GO:0140014 mitotic nuclear division BP
GO:1903046 meiotic cell cycle process BP
GO:1903047 mitotic cell cycle process BP
KEGG Term Name Description
map04120 Ubiquitin mediated proteolysis Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.