Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B292165
Position
aalba5_s00003410:101575-101814 (+)
239bp
Gene Type
gene
Gene Description (Protein Product)
Plays a role in the arabinosylation of cell wall components. Involved in the arabinosylation of extensin proteins in root hair cells. Extensins are structural glycoproteins present in cell walls and its arabinosylation is important for root hair cell development
Organism
Abies alba
Also AS AT1G19360

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B473474 hydroxyproline O-arabinosyltransferase activity
AALBA5B564339 Nucleotide-diphospho-sugar transferase
AALBA5B748057 -
Regulatory gene
AALBA5B013896 lysine-specific demethylase
AALBA5B037834 Transcription factor ABORTED
AALBA5B040153 helix loop helix domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0012505 endomembrane system CC
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0021700 developmental maturation BP
GO:0022622 root system development BP
GO:0030154 cell differentiation BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042546 cell wall biogenesis BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048364 root development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071695 anatomical structure maturation BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080147 root hair cell development BP
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0097708 intracellular vesicle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0099402 plant organ development BP
GO:1905392 plant organ morphogenesis BP
KEGG Term Name Description
map00514 Other types of O-glycan biosynthesis O-mannosyl glycans are a type of O-glycans that are found both in eukaryotes and prokaryotes. Biosynthesis of O-mannosyl glycans is initiated by the transfer of mannose from Man-P-Dol to serine or threonine residue, which is catalyzed by protein O-mannosyltransferases POMT1 and POMT2. Defects of these genes are linked to human diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].