PPGR - Gene Detail

Basic Information

Gene ID	AALBA5B320417
Position	aalba5_s00106617:10187-11025 (-) 838bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the STXBP unc-18 SEC1 family
Organism	Abies alba
Also AS	AT1G12360

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AALBA5B900851 Belongs to the synaptobrevin family

AALBA5B462503 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

AALBA5B762863 ubiquitin-NEDD8-like protein

Regulatory gene

AALBA5B002813 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

AALBA5B023305 dof zinc finger protein

AALBA5B034007 atrl6,rl6,rsm3

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0016020	membrane	CC
GO:0019898	extrinsic component of membrane	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0071944	cell periphery	CC