Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B487710
Position
aalba5_s00126127:11682-14164 (-)
2482bp
Gene Type
gene
Gene Description (Protein Product)
serine racemase
Organism
Abies alba
Also AS AT4G11640

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B867846 Interconversion of serine and glycine
AALBA5B764174 Long chain base biosynthesis protein
AALBA5B874993 tryptophan synthase beta chain
Regulatory gene
AALBA5B002813 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
AALBA5B034007 atrl6,rl6,rsm3
AALBA5B043151 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0000287 magnesium ion binding MF
GO:0002237 response to molecule of bacterial origin BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003941 L-serine ammonia-lyase activity MF
GO:0005488 binding MF
GO:0005509 calcium ion binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006082 organic acid metabolic process BP
GO:0006090 pyruvate metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006563 L-serine metabolic process BP
GO:0006564 L-serine biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0008721 D-serine ammonia-lyase activity MF
GO:0009058 biosynthetic process BP
GO:0009069 serine family amino acid metabolic process BP
GO:0009070 serine family amino acid biosynthetic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0016043 cellular component organization BP
GO:0016053 organic acid biosynthetic process BP
GO:0016594 glycine binding MF
GO:0016597 amino acid binding MF
GO:0016829 lyase activity MF
GO:0016840 carbon-nitrogen lyase activity MF
GO:0016841 ammonia-lyase activity MF
GO:0016853 isomerase activity MF
GO:0016854 racemase and epimerase activity MF
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives MF
GO:0017076 purine nucleotide binding MF
GO:0017144 xenobiotic metabolic process BP
GO:0018114 threonine racemase activity MF
GO:0019752 carboxylic acid metabolic process BP
GO:0019842 vitamin binding MF
GO:0019904 protein domain specific binding MF
GO:0022607 cellular component assembly BP
GO:0030165 PDZ domain binding MF
GO:0030170 pyridoxal phosphate binding MF
GO:0030378 serine racemase activity MF
GO:0030554 adenyl nucleotide binding MF
GO:0031406 carboxylic acid binding MF
GO:0032496 response to lipopolysaccharide BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032787 monocarboxylic acid metabolic process BP
GO:0033993 response to lipid BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0036361 racemase activity, acting on amino acids and derivatives MF
GO:0036477 somatodendritic compartment CC
GO:0042165 neurotransmitter binding MF
GO:0042221 response to chemical BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0042866 pyruvate biosynthetic process BP
GO:0043025 neuronal cell body CC
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043169 cation binding MF
GO:0043177 organic acid binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043436 oxoacid metabolic process BP
GO:0043621 protein self-association MF
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044297 cell body CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046416 D-amino acid metabolic process BP
GO:0046437 D-amino acid biosynthetic process BP
GO:0046872 metal ion binding MF
GO:0046983 protein dimerization activity MF
GO:0047661 amino-acid racemase activity MF
GO:0048037 obsolete cofactor binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0051259 protein complex oligomerization BP
GO:0051260 protein homooligomerization BP
GO:0051262 protein tetramerization BP
GO:0051289 protein homotetramerization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0065003 protein-containing complex assembly BP
GO:0070178 D-serine metabolic process BP
GO:0070179 D-serine biosynthetic process BP
GO:0070279 vitamin B6 binding MF
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0097458 obsolete neuron part CC
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].