Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B799953
Position
aalba5_s00105462:26162-31356 (+)
5194bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the synaptobrevin family
Organism
Abies alba
Also AS AT1G11890

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B801896 Involved in transport of proteins from the cis medial- Golgi to the trans-Golgi network
AALBA5B904141 Involved in transport of proteins from the cis medial- Golgi to the trans-Golgi network
AALBA5B880061 Belongs to the syntaxin family
Regulatory gene
AALBA5B003860 Myb-like protein L
AALBA5B013896 lysine-specific demethylase
AALBA5B014981 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0003674 molecular_function MF
GO:0005484 SNAP receptor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005794 Golgi apparatus CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0031201 SNARE complex CC
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046903 secretion BP
GO:0048284 organelle fusion BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090174 organelle membrane fusion BP
GO:0098796 membrane protein complex CC
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map04130 SNARE interactions in vesicular transport -