Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B905403
Position
aalba5_s00072262:17193-19084 (+)
1891bp
Gene Type
gene
Gene Description (Protein Product)
E3 ubiquitin-protein ligase
Organism
Abies alba
Also AS AT3G09770

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B942020 belongs to the protein kinase superfamily
Regulatory gene
AALBA5B002813 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
AALBA5B003860 Myb-like protein L
AALBA5B014981 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008277 regulation of G protein-coupled receptor signaling pathway BP
GO:0008589 regulation of smoothened signaling pathway BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0023051 regulation of signaling BP
GO:0023057 negative regulation of signaling BP
GO:0032446 protein modification by small protein conjugation BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043949 regulation of cAMP-mediated signaling BP
GO:0043951 negative regulation of cAMP-mediated signaling BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0045744 negative regulation of G protein-coupled receptor signaling pathway BP
GO:0045879 negative regulation of smoothened signaling pathway BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1902531 regulation of intracellular signal transduction BP
GO:1902532 negative regulation of intracellular signal transduction BP
KEGG Term Name Description
map04120 Ubiquitin mediated proteolysis Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.