Basic Information
Gene ID
AALBA5B910941
Position
aalba5_s00287387:5382-5934 (-)
552bp
Gene Type
gene
Gene Description (Protein Product)
Pre-mRNA-splicing factor
Organism
Also AS AT3G49430

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B915485 serine arginine-rich splicing factor
AALBA5B912510 Peptidyl-prolyl cis-trans
AALBA5B947267 Peptidyl-prolyl cis-trans
Regulatory gene
AALBA5B023305 dof zinc finger protein
AALBA5B087213 Cyclic dof factor
AALBA5B1073687 AP2-like ethylene-responsive transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.