Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B911693
Position
aalba5_s00024376:26761-28689 (+)
1928bp
Gene Type
gene
Gene Description (Protein Product)
Small nuclear ribonucleoprotein-associated protein
Organism
Abies alba
Also AS AT5G44500

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B982937 DNA-damage-repair toleration protein DRT111
AALBA5B986794 U-box domain-containing protein
AALBA5B933416 pre-mRNA-splicing factor
Regulatory gene
AALBA5B008240 Squamosa promoter-binding-like protein
AALBA5B028840 Squamosa promoter-binding-like protein 7
AALBA5B037834 Transcription factor ABORTED

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.