Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B967152
Position
aalba5_s00001569:120167-121980 (-)
1813bp
Gene Type
gene
Gene Description (Protein Product)
Tetratricopeptide repeat
dnaJ homolog subfamily C member 3 homolog
Organism
Abies alba
Also AS AT5G03160

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B981637 Zinc finger protein CONSTANS-like
Regulatory gene
AALBA5B003860 Myb-like protein L
AALBA5B014981 transcription factor
AALBA5B039723 (NAC) domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005788 endoplasmic reticulum lumen CC
GO:0005886 plasma membrane CC
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0031974 membrane-enclosed lumen CC
GO:0035821 modulation of process of another organism BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043900 obsolete regulation of multi-organism process BP
GO:0043902 obsolete positive regulation of multi-organism process BP
GO:0043903 regulation of biological process involved in symbiotic interaction BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044788 modulation by host of viral process BP
GO:0044794 positive regulation by host of viral process BP
GO:0048518 positive regulation of biological process BP
GO:0048524 positive regulation of viral process BP
GO:0050789 regulation of biological process BP
GO:0050792 regulation of viral process BP
GO:0051702 biological process involved in interaction with symbiont BP
GO:0051704 obsolete multi-organism process BP
GO:0051817 obsolete modulation of process of other organism involved in symbiotic interaction BP
GO:0051851 modulation by host of symbiont process BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071944 cell periphery CC
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.