Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B980950
Position
aalba5_s00600682:1092-1587 (-)
495bp
Gene Type
gene
Gene Description (Protein Product)
Splicing factor 3B subunit
Organism
Abies alba
Also AS AT5G64270

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B994520 Pre-mRNA-splicing factor ATP-dependent RNA
AALBA5B987179 Belongs to the actin family
AALBA5B990821 Splicing factor 3B subunit
Regulatory gene
AALBA5B001463 Myb family transcription factor APL
AALBA5B023305 dof zinc finger protein
AALBA5B043151 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.