Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
EVM0003851
View in Genome Browser
Position
GWHASIS00000029:33480484-33483660 (+)
3176bp
Gene Type
gene
Gene Description (Protein Product)
radicals which are normally produced within the cells and which are toxic to biological systems
Organism
Acer catalpifolium
Also AS AT3G10920

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0007808 radicals which are normally produced within the cells and which are toxic to biological systems
EVM0017238 Superoxide dismutase
EVM0030641 Superoxide dismutase
Regulatory gene
EVM0000098 DnaJ homolog; subfamily C; member
EVM0001481 Transcription factor
EVM0003288 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006970 response to osmotic stress BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010043 response to zinc ion BP
GO:0010154 fruit development BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042221 response to chemical BP
GO:0042742 defense response to bacterium BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0061458 reproductive system development BP
GO:0098542 defense response to other organism BP
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.