PPGR - Gene Detail

Basic Information

Gene ID	EVM0004077 View in Genome Browser
Position	GWHASIS00001318:17356235-17359269 (-) 3034bp
Gene Type	gene
Gene Description (Protein Product)	oligopeptide transporter
Organism	Acer catalpifolium
Also AS	AT4G16370

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

EVM0030206 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

EVM0023781 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation

EVM0007751 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

EVM0000098 DnaJ homolog; subfamily C; member

EVM0000563 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

EVM0000691 radialis-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000041	transition metal ion transport	BP
GO:0003674	molecular_function	MF
GO:0005215	transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006812	monoatomic cation transport	BP
GO:0006826	iron ion transport	BP
GO:0006873	intracellular monoatomic ion homeostasis	BP
GO:0006875	obsolete intracellular metal ion homeostasis	BP
GO:0008150	biological_process	BP
GO:0008324	monoatomic cation transmembrane transporter activity	MF
GO:0009506	plasmodesma	CC
GO:0009987	cellular process	BP
GO:0010232	vascular transport	BP
GO:0010233	phloem transport	BP
GO:0015075	monoatomic ion transmembrane transporter activity	MF
GO:0015318	inorganic molecular entity transmembrane transporter activity	MF
GO:0016020	membrane	CC
GO:0019725	cellular homeostasis	BP
GO:0022857	transmembrane transporter activity	MF
GO:0022890	inorganic cation transmembrane transporter activity	MF
GO:0030001	metal ion transport	BP
GO:0030003	intracellular monoatomic cation homeostasis	BP
GO:0030054	cell junction	CC
GO:0032501	multicellular organismal process	BP
GO:0034220	monoatomic ion transmembrane transport	BP
GO:0042592	homeostatic process	BP
GO:0044464	obsolete cell part	CC
GO:0046873	metal ion transmembrane transporter activity	MF
GO:0046915	transition metal ion transmembrane transporter activity	MF
GO:0048878	chemical homeostasis	BP
GO:0050801	monoatomic ion homeostasis	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0055044	symplast	CC
GO:0055065	obsolete metal ion homeostasis	BP
GO:0055072	iron ion homeostasis	BP
GO:0055076	obsolete transition metal ion homeostasis	BP
GO:0055080	monoatomic cation homeostasis	BP
GO:0055082	intracellular chemical homeostasis	BP
GO:0055085	transmembrane transport	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071944	cell periphery	CC
GO:0098655	monoatomic cation transmembrane transport	BP
GO:0098771	inorganic ion homeostasis	BP
GO:1990388	xylem-to-phloem iron transport	BP