Basic Information
Gene ID
Position
GWHASIS00000052:3842377-3845127 (+)
2750bp
Gene Type
gene
Gene Description (Protein Product)
Lignin degradation and detoxification of lignin-derived products
Organism
Also AS AT5G60020

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0033566 cyclic nucleotide-gated ion channel
EVM0021498 cyclic nucleotide-gated ion channel
EVM0031383 cyclic nucleotide-gated ion channel
Regulatory gene
EVM0000098 DnaJ homolog; subfamily C; member
EVM0000691 radialis-like
EVM0001373 Transcriptional regulator

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006725 cellular aromatic compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009698 phenylpropanoid metabolic process BP
GO:0009699 phenylpropanoid biosynthetic process BP
GO:0009808 lignin metabolic process BP
GO:0009809 lignin biosynthetic process BP
GO:0009987 cellular process BP
GO:0016491 oxidoreductase activity MF
GO:0016722 oxidoreductase activity, acting on metal ions MF
GO:0019438 aromatic compound biosynthetic process BP
GO:0019748 secondary metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044550 secondary metabolite biosynthetic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP