PPGR - Gene Detail

Basic Information

Gene ID	EVM0020983 View in Genome Browser
Position	GWHASIS00001978:11488907-11492418 (-) 3511bp
Gene Type	gene
Gene Description (Protein Product)	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Organism	Acer catalpifolium
Also AS	AT4G11120

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

EVM0027814 Ribosome-recycling factor

EVM0023448 Removes the formyl group from the N-terminal Met of newly synthesized proteins

EVM0029780 Belongs to the small Tim family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0003746	translation elongation factor activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005759	mitochondrial matrix	CC
GO:0006412	translation	BP
GO:0006414	translational elongation	BP
GO:0006518	peptide metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008135	translation factor activity, RNA binding	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010467	gene expression	BP
GO:0019538	protein metabolic process	BP
GO:0031974	membrane-enclosed lumen	CC
GO:0032543	mitochondrial translation	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0043043	peptide biosynthetic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043603	amide metabolic process	BP
GO:0043604	amide biosynthetic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044429	obsolete mitochondrial part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0070013	intracellular organelle lumen	CC
GO:0070125	mitochondrial translational elongation	BP
GO:0071704	organic substance metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0140053	mitochondrial gene expression	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP