Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
EVM0021751
View in Genome Browser
Position
GWHASIS00000001:19030454-19035122 (-)
4668bp
Gene Type
gene
Gene Description (Protein Product)
F-box protein
Organism
Acer catalpifolium
Also AS AT1G21410

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0025910 Belongs to the cullin family
EVM0021963 Belongs to the cullin family
EVM0028300 transcription factor
Regulatory gene
EVM0001315 transcription factor that promotes early floral meristem identity in synergy with APETALA1; FRUITFULL and LEAFY. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Seems to be partially redundant to the function of APETALA1
EVM0003629 MADS-box protein
EVM0005245 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010033 response to organic substance BP
GO:0010101 post-embryonic root morphogenesis BP
GO:0010102 lateral root morphogenesis BP
GO:0010286 heat acclimation BP
GO:0010311 lateral root formation BP
GO:0010498 proteasomal protein catabolic process BP
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019005 SCF ubiquitin ligase complex CC
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0022622 root system development BP
GO:0030163 protein catabolic process BP
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032446 protein modification by small protein conjugation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0032991 protein-containing complex CC
GO:0036211 protein modification process BP
GO:0042221 response to chemical BP
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048364 root development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048527 lateral root development BP
GO:0048528 post-embryonic root development BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051302 regulation of cell division BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0051781 positive regulation of cell division BP
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071365 cellular response to auxin stimulus BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0090696 post-embryonic plant organ development BP
GO:0090697 post-embryonic plant organ morphogenesis BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0099402 plant organ development BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901332 negative regulation of lateral root development BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1902494 catalytic complex CC
GO:1905392 plant organ morphogenesis BP
GO:1905393 plant organ formation BP
GO:1990234 transferase complex CC
GO:2000023 regulation of lateral root development BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000069 regulation of post-embryonic root development BP
GO:2000280 regulation of root development BP
KEGG Term Name Description
map04120 Ubiquitin mediated proteolysis Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.