Basic Information
Gene ID
Position
GWHASIS00001318:30167736-30172960 (-)
5224bp
Gene Type
gene
Gene Description (Protein Product)
Pre-mRNA-splicing factor ATP-dependent RNA
Organism
Also AS AT3G26560

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0032289 Small ubiquitin-related modifier
EVM0027220 Small ubiquitin-related modifier
EVM0022283 protein At4g01020; chloroplastic
Regulatory gene
EVM0000345 NAC domain-containing protein
EVM0000787 NAC domain-containing protein
EVM0001806 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.