PPGR - Gene Detail

Basic Information

Gene ID	EVM0025277 View in Genome Browser
Position	GWHASIS00000025:10747362-10750912 (+) 3550bp
Gene Type	gene
Gene Description (Protein Product)	Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step; the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites; respectively. Catalyzes the coordinated movement of the two tRNA molecules; the mRNA and conformational changes in the ribosome
Organism	Acer catalpifolium
Also AS	AT1G62750

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

EVM0029823 Protein SCO1 homolog 2

EVM0030206 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

EVM0028242 Ubiquitin-2 like Rad60 SUMO-like

Regulatory gene

EVM0006322 dof zinc finger protein

EVM0008791 Cyclic dof factor

EVM0014978 Cyclic dof factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005524	ATP binding	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006996	organelle organization	BP
GO:0007275	multicellular organism development	BP
GO:0008144	obsolete drug binding	MF
GO:0008150	biological_process	BP
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009657	plastid organization	BP
GO:0009658	chloroplast organization	BP
GO:0009791	post-embryonic development	BP
GO:0009845	seed germination	BP
GO:0009941	chloroplast envelope	CC
GO:0009987	cellular process	BP
GO:0016043	cellular component organization	BP
GO:0017076	purine nucleotide binding	MF
GO:0030554	adenyl nucleotide binding	MF
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032553	ribonucleotide binding	MF
GO:0032555	purine ribonucleotide binding	MF
GO:0032559	adenyl ribonucleotide binding	MF
GO:0035639	purine ribonucleoside triphosphate binding	MF
GO:0036094	small molecule binding	MF
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048046	apoplast	CC
GO:0048856	anatomical structure development	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090351	seedling development	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097367	carbohydrate derivative binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901363	heterocyclic compound binding	MF