Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
EVM0027094
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Position
GWHASIS00001971:35223094-35225434 (+)
2340bp
Gene Type
gene
Gene Description (Protein Product)
Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex; participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators; where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery
Organism
Acer catalpifolium
Also AS AT3G27100

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0032985 Ubiquitin carboxyl-terminal hydrolase
EVM0028103 TONNEAU 1a-like
EVM0027924 Calcium-binding protein PBP1-like
Regulatory gene
EVM0006322 dof zinc finger protein
EVM0007048 B3 domain-containing transcription factor
EVM0007645 Protein tesmin TSO1-like CXC

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail