Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
EVM0028000
View in Genome Browser
Position
GWHASIS00000029:24300958-24302857 (+)
1899bp
Gene Type
gene
Gene Description (Protein Product)
Ribosomal S17
Organism
Acer catalpifolium
Also AS AT5G04800

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0032616 40S ribosomal protein
EVM0030661 ubiquitin-40S ribosomal protein
EVM0029803 Ribosomal protein S8
Regulatory gene
EVM0001315 transcription factor that promotes early floral meristem identity in synergy with APETALA1; FRUITFULL and LEAFY. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Seems to be partially redundant to the function of APETALA1
EVM0003629 MADS-box protein
EVM0005245 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000028 ribosomal small subunit assembly BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0003735 structural constituent of ribosome MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005840 ribosome CC
GO:0005886 plasma membrane CC
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0015935 small ribosomal subunit CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0022607 cellular component assembly BP
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0022618 ribonucleoprotein complex assembly BP
GO:0022626 cytosolic ribosome CC
GO:0022627 cytosolic small ribosomal subunit CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0034622 protein-containing complex assembly BP
GO:0042254 ribosome biogenesis BP
GO:0042255 ribosome assembly BP
GO:0042274 ribosomal small subunit biogenesis BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044391 ribosomal subunit CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0065003 protein-containing complex assembly BP
GO:0070013 intracellular organelle lumen CC
GO:0070925 organelle assembly BP
GO:0071826 ribonucleoprotein complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1990904 ribonucleoprotein complex CC
KEGG Term Name Description
map03010 Ribosome -