PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	EVM0029865 View in Genome Browser
Position	GWHASIS00000025:16148310-16151469 (-) 3159bp
Gene Type	gene
Gene Description (Protein Product)	Autophagy protein 16 (ATG16)
Organism	Acer catalpifolium
Also AS	AT5G50230

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	EVM0031589 Phosphoinositide 3-kinase regulatory subunit EVM0029982 Autophagy-related protein EVM0031272 Autophagy-related protein 3
Regulatory gene	EVM0000394 homeobox-leucine zipper protein EVM0000738 PHR1-LIKE 1-like EVM0000951 homeobox-leucine zipper protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000045	autophagosome assembly	BP
GO:0000421	autophagosome membrane	CC
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005774	vacuolar membrane	CC
GO:0005776	autophagosome	CC
GO:0006508	proteolysis	BP
GO:0006511	ubiquitin-dependent protein catabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0006897	endocytosis	BP
GO:0006907	pinocytosis	BP
GO:0006909	phagocytosis	BP
GO:0006914	autophagy	BP
GO:0006996	organelle organization	BP
GO:0007033	vacuole organization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009987	cellular process	BP
GO:0010498	proteasomal protein catabolic process	BP
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016192	vesicle-mediated transport	BP
GO:0016236	macroautophagy	BP
GO:0016740	transferase activity	MF
GO:0019538	protein metabolic process	BP
GO:0019776	Atg8 ligase activity	MF
GO:0019941	modification-dependent protein catabolic process	BP
GO:0022607	cellular component assembly	BP
GO:0030163	protein catabolic process	BP
GO:0030587	sorocarp development	BP
GO:0031090	organelle membrane	CC
GO:0031154	culmination involved in sorocarp development	BP
GO:0032502	developmental process	BP
GO:0032991	protein-containing complex	CC
GO:0034274	Atg12-Atg5-Atg16 complex	CC
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043632	modification-dependent macromolecule catabolic process	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044257	protein catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044265	cellular macromolecule catabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044437	obsolete vacuolar part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048856	anatomical structure development	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051603	proteolysis involved in protein catabolic process	BP
GO:0051703	biological process involved in intraspecies interaction between organisms	BP
GO:0051704	obsolete multi-organism process	BP
GO:0061919	process utilizing autophagic mechanism	BP
GO:0070925	organelle assembly	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090382	phagosome maturation	BP
GO:0090702	socially cooperative development	BP
GO:0098588	bounding membrane of organelle	CC
GO:0098657	import into cell	BP
GO:0098805	membrane	CC
GO:0099120	socially cooperative development	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1902494	catalytic complex	CC
GO:1905037	autophagosome organization	BP
GO:1990234	transferase complex	CC