Basic Information
Gene ID
Position
GWHASIS00000052:8727544-8727972 (-)
428bp
Gene Type
gene
Gene Description (Protein Product)
RNA recognition motif
Organism
Also AS AT1G34140

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0032745 Pre-mRNA-splicing factor ATP-dependent RNA helicase
EVM0033996 Mitosis protein DIM1
EVM0032806 U5 small nuclear ribonucleoprotein 200 kDa
Regulatory gene
EVM0001373 Transcriptional regulator
EVM0001785 transcription factor
EVM0002314 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.