Basic Information
Gene ID
Position
GWHASIS00000025:37505574-37507033 (+)
1459bp
Gene Type
gene
Gene Description (Protein Product)
Coiled-coil domain-containing protein
Organism
Also AS AT3G05070

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0034302 U5 small nuclear ribonucleoprotein 40 kDa
EVM0033150 heterogeneous nuclear ribonucleoprotein
EVM0033130 Protein SDE2 homolog
Regulatory gene
EVM0017728 Protein BASIC PENTACYSTEINE7-like
EVM0023251 Protein BASIC PENTACYSTEINE4-like
EVM0028830 Protein BASIC PENTACYSTEINE2-like

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.