PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	ACNE_02632.g View in Genome Browser
Position	acne_004:8908076-8909017 (-) 941bp
Gene Type	gene
Gene Description (Protein Product)	zinc finger CCCH domain-containing protein
Organism	Acer negundo
Also AS	AT4G29190

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	ACNE_22950.g Catalyzes the oxidation of L-aspartate to iminoaspartate ACNE_10662.g Encoded by ACNE_06200.g Encoded by
Regulatory gene	ACNE_00701.g Transcription factor ACNE_00721.g Trihelix transcription factor ACNE_01136.g dof zinc finger protein
Target gene	ACNE_00466.g ribonuclease H protein At1g65750-like ACNE_00691.g Phytochrome A-associated F-box ACNE_00926.g endonuclease activity

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005886	plasma membrane	CC
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0007275	multicellular organism development	BP
GO:0007568	aging	BP
GO:0008150	biological_process	BP
GO:0008270	zinc ion binding	MF
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009753	response to jasmonic acid	BP
GO:0009755	hormone-mediated signaling pathway	BP
GO:0009867	jasmonic acid mediated signaling pathway	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010150	leaf senescence	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0016020	membrane	CC
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0023052	signaling	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032870	cellular response to hormone stimulus	BP
GO:0042221	response to chemical	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071229	cellular response to acid chemical	BP
GO:0071310	cellular response to organic substance	BP
GO:0071395	cellular response to jasmonic acid stimulus	BP
GO:0071495	cellular response to endogenous stimulus	BP
GO:0071944	cell periphery	CC
GO:0080090	regulation of primary metabolic process	BP
GO:0090693	plant organ senescence	BP
GO:0099402	plant organ development	BP
GO:0140110	transcription regulator activity	MF
GO:1901700	response to oxygen-containing compound	BP
GO:1901701	cellular response to oxygen-containing compound	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP