PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	ACNE_17561.g View in Genome Browser
Position	acne_003:45465844-45468745 (+) 2901bp
Gene Type	gene
Gene Description (Protein Product)	Pentatricopeptide repeat-containing protein
Organism	Acer negundo
Also AS	AT4G14850

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	ACNE_23953.g Pentatricopeptide repeat-containing protein ACNE_25558.g protein At3g15000, mitochondrial-like ACNE_21045.g ETO1-like protein 1
Regulatory gene	ACNE_01136.g dof zinc finger protein ACNE_03642.g dof zinc finger protein ACNE_05948.g MADS-box protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0003727	single-stranded RNA binding	MF
GO:0003824	catalytic activity	MF
GO:0004518	nuclease activity	MF
GO:0004519	endonuclease activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006081	cellular aldehyde metabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006084	acetyl-CoA metabolic process	BP
GO:0006090	pyruvate metabolic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006637	acyl-CoA metabolic process	BP
GO:0006644	phospholipid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008202	steroid metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0008654	phospholipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009240	isopentenyl diphosphate biosynthetic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009451	RNA modification	BP
GO:0009987	cellular process	BP
GO:0016070	RNA metabolic process	BP
GO:0016125	sterol metabolic process	BP
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0019287	isopentenyl diphosphate biosynthetic process, mevalonate pathway	BP
GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019682	glyceraldehyde-3-phosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0022622	root system development	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0033865	nucleoside bisphosphate metabolic process	BP
GO:0033875	ribonucleoside bisphosphate metabolic process	BP
GO:0034032	purine nucleoside bisphosphate metabolic process	BP
GO:0034046	poly(G) binding	MF
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0035383	thioester metabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043436	oxoacid metabolic process	BP
GO:0043603	amide metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0046490	isopentenyl diphosphate metabolic process	BP
GO:0048364	root development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0050790	regulation of catalytic activity	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0065009	regulation of molecular function	BP
GO:0070717	poly-purine tract binding	MF
GO:0071704	organic substance metabolic process	BP
GO:0072521	purine-containing compound metabolic process	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0090305	nucleic acid phosphodiester bond hydrolysis	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0099402	plant organ development	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP