Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
ACNE_17742.g
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Position
acne_101:31999213-32002243 (-)
3030bp
Gene Type
gene
Gene Description (Protein Product)
gag-polypeptide of LTR copia-type
Organism
Acer negundo
Also AS AT4G00980

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_19885.g Thioredoxin
ACNE_17877.g RNA polymerase II transcriptional coactivator
ACNE_30176.g Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity
Regulatory gene
ACNE_01136.g dof zinc finger protein
ACNE_03642.g dof zinc finger protein
ACNE_05948.g MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail