PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	ACNE_18573.g View in Genome Browser
Position	acne_108:23792989-23795502 (+) 2513bp
Gene Type	gene
Gene Description (Protein Product)	E3 ubiquitin-protein ligase
Organism	Acer negundo
Also AS	AT5G01160

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

ACNE_20395.g transposition, RNA-mediated

ACNE_19981.g THO complex subunit

ACNE_27006.g THO complex subunit

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0001510	RNA methylation	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004842	ubiquitin-protein transferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006464	protein modification process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007162	negative regulation of cell adhesion	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009451	RNA modification	BP
GO:0009987	cellular process	BP
GO:0016070	RNA metabolic process	BP
GO:0016071	mRNA metabolic process	BP
GO:0016556	mRNA modification	BP
GO:0016567	protein ubiquitination	BP
GO:0016740	transferase activity	MF
GO:0019538	protein metabolic process	BP
GO:0019787	ubiquitin-like protein transferase activity	MF
GO:0030100	regulation of endocytosis	BP
GO:0030155	regulation of cell adhesion	BP
GO:0030334	regulation of cell migration	BP
GO:0030335	positive regulation of cell migration	BP
GO:0032259	methylation	BP
GO:0032446	protein modification by small protein conjugation	BP
GO:0032879	regulation of localization	BP
GO:0032991	protein-containing complex	CC
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034708	methyltransferase complex	CC
GO:0036211	protein modification process	BP
GO:0036396	RNA N6-methyladenosine methyltransferase complex	CC
GO:0040012	regulation of locomotion	BP
GO:0040017	positive regulation of locomotion	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043414	macromolecule methylation	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0045293	mRNA editing complex	CC
GO:0045807	positive regulation of endocytosis	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051049	regulation of transport	BP
GO:0051050	positive regulation of transport	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051130	positive regulation of cellular component organization	BP
GO:0051270	obsolete regulation of cellular component movement	BP
GO:0051272	obsolete positive regulation of cellular component movement	BP
GO:0060627	regulation of vesicle-mediated transport	BP
GO:0065007	biological regulation	BP
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0071704	organic substance metabolic process	BP
GO:0080009	mRNA methylation	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC
GO:2000145	regulation of cell motility	BP
GO:2000147	positive regulation of cell motility	BP