PPGR - Gene Detail

Basic Information

Gene ID	ACNE_21051.g View in Genome Browser
Position	acne_108:25028584-25033803 (+) 5219bp
Gene Type	gene
Gene Description (Protein Product)	"transposition
Organism	Acer negundo
Also AS	AT3G08800

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

ACNE_27815.g Cleavage and polyadenylation specificity factor subunit

ACNE_26744.g transcription factor

ACNE_27341.g Integrator complex subunit

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003002	regionalization	BP
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005768	endosome	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006396	RNA processing	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0007275	multicellular organism development	BP
GO:0007389	pattern specification process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009956	radial pattern formation	BP
GO:0009987	cellular process	BP
GO:0010467	gene expression	BP
GO:0010496	intercellular transport	BP
GO:0012505	endomembrane system	CC
GO:0016070	RNA metabolic process	BP
GO:0016073	snRNA metabolic process	BP
GO:0016180	snRNA processing	BP
GO:0022622	root system development	BP
GO:0031123	RNA 3'-end processing	BP
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0034470	ncRNA processing	BP
GO:0034472	snRNA 3'-end processing	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034660	ncRNA metabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043628	regulatory ncRNA 3'-end processing	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0048364	root development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0071704	organic substance metabolic process	BP
GO:0090057	root radial pattern formation	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0097708	intracellular vesicle	CC
GO:0099402	plant organ development	BP
GO:1901360	organic cyclic compound metabolic process	BP