Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
ACNE_23946.g
View in Genome Browser
Position
acne_002:7938999-7946382 (-)
7383bp
Gene Type
gene
Gene Description (Protein Product)
Small RNA
Organism
Acer negundo
Also AS AT4G20910

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_23957.g Protein HASTY 1 isoform X1
ACNE_29009.g Belongs to the argonaute family
ACNE_25567.g Belongs to the argonaute family
Regulatory gene
ACNE_01136.g dof zinc finger protein
ACNE_03642.g dof zinc finger protein
ACNE_05948.g MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001510 RNA methylation BP
GO:0002252 immune effector process BP
GO:0002376 immune system process BP
GO:0003002 regionalization BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006379 mRNA cleavage BP
GO:0006396 RNA processing BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008168 methyltransferase activity MF
GO:0008173 RNA methyltransferase activity MF
GO:0009451 RNA modification BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009615 response to virus BP
GO:0009616 RNAi-mediated antiviral immune response BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009892 negative regulation of metabolic process BP
GO:0009908 flower development BP
GO:0009909 regulation of flower development BP
GO:0009954 proximal/distal pattern formation BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010051 xylem and phloem pattern formation BP
GO:0010093 specification of floral organ identity BP
GO:0010305 leaf vascular tissue pattern formation BP
GO:0010467 gene expression BP
GO:0010468 regulation of gene expression BP
GO:0010589 leaf proximal/distal pattern formation BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010608 post-transcriptional regulation of gene expression BP
GO:0010629 negative regulation of gene expression BP
GO:0014070 response to organic cyclic compound BP
GO:0016070 RNA metabolic process BP
GO:0016071 mRNA metabolic process BP
GO:0016441 post-transcriptional gene silencing BP
GO:0016458 obsolete gene silencing BP
GO:0016740 transferase activity MF
GO:0016741 transferase activity, transferring one-carbon groups MF
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0031047 RNA-mediated gene silencing BP
GO:0031050 ncRNA processing BP
GO:0032259 methylation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0035194 RNA-mediated post-transcriptional gene silencing BP
GO:0035195 miRNA-mediated gene silencing BP
GO:0035196 miRNA processing BP
GO:0035279 miRNA-mediated gene silencing by mRNA destabilization BP
GO:0035821 modulation of process of another organism BP
GO:0040029 epigenetic regulation of gene expression BP
GO:0042221 response to chemical BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043331 response to dsRNA BP
GO:0043412 macromolecule modification BP
GO:0043414 macromolecule methylation BP
GO:0044003 modulation by symbiont of host process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0046483 heterocycle metabolic process BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048444 floral organ morphogenesis BP
GO:0048449 floral organ formation BP
GO:0048519 negative regulation of biological process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048608 reproductive structure development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051607 defense response to virus BP
GO:0051701 biological process involved in interaction with host BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0051817 obsolete modulation of process of other organism involved in symbiotic interaction BP
GO:0052018 obsolete modulation by symbiont of RNA levels in host BP
GO:0052249 obsolete modulation of RNA levels in other organism involved in symbiotic interaction BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0070918 regulatory ncRNA processing BP
GO:0071310 cellular response to organic substance BP
GO:0071359 cellular response to dsRNA BP
GO:0071407 cellular response to organic cyclic compound BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0090305 nucleic acid phosphodiester bond hydrolysis BP
GO:0090501 RNA phosphodiester bond hydrolysis BP
GO:0090567 reproductive shoot system development BP
GO:0090696 post-embryonic plant organ development BP
GO:0090697 post-embryonic plant organ morphogenesis BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0090701 specification of plant organ identity BP
GO:0098542 defense response to other organism BP
GO:0098586 cellular response to virus BP
GO:0098795 global gene silencing by mRNA cleavage BP
GO:0099402 plant organ development BP
GO:0140098 catalytic activity, acting on RNA MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901698 response to nitrogen compound BP
GO:1901699 cellular response to nitrogen compound BP
GO:1905392 plant organ morphogenesis BP
GO:1905393 plant organ formation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000241 regulation of reproductive process BP