Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
ACNE_24046.g
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Position
acne_001:3584281-3587103 (+)
2822bp
Gene Type
gene
Gene Description (Protein Product)
Methyladenine glycosylase
Organism
Acer negundo
Also AS AT1G75090

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_28992.g endonuclease III
ACNE_29576.g DNA-3-methyladenine glycosylase
ACNE_25304.g Belongs to the helicase family. RecQ subfamily
Regulatory gene
ACNE_01136.g dof zinc finger protein
ACNE_03642.g dof zinc finger protein
ACNE_05948.g MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03410 Base excision repair Base excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair initiated by lesion-specific DNA glycosylases and completed by either of the two sub-pathways: short-patch BER where only one nucleotide is replaced and long-patch BER where 2-13 nucleotides are replaced. Each sub-pathway of BER relies on the formation of protein complexes that assemble at the site of the DNA lesion and facilitate repair in a coordinated fashion. This process of complex formation appears to provide an increase in specificity and efficiency to the BER pathway, thereby facilitating the maintenance of genome integrity by preventing the accumulation of highly toxic repair intermediates.