Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
ACNE_24094.g
View in Genome Browser
Position
acne_101:30205383-30210253 (+)
4870bp
Gene Type
gene
Gene Description (Protein Product)
ABC transporter B family member
Organism
Acer negundo
Also AS AT1G02520

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_29167.g Plasma membrane ATPase
ACNE_24875.g Belongs to the MIP aquaporin (TC 1.A.8) family
ACNE_26902.g Belongs to the MIP aquaporin (TC 1.A.8) family
Regulatory gene
ACNE_01136.g dof zinc finger protein
ACNE_03642.g dof zinc finger protein
ACNE_07373.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006855 xenobiotic transmembrane transport BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008559 ABC-type xenobiotic transporter activity MF
GO:0009506 plasmodesma CC
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009630 gravitropism BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009735 response to cytokinin BP
GO:0009888 tissue development BP
GO:0009914 hormone transport BP
GO:0009926 auxin polar transport BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010033 response to organic substance BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0010315 auxin export across the plasma membrane BP
GO:0010328 auxin influx transmembrane transporter activity MF
GO:0010329 auxin efflux transmembrane transporter activity MF
GO:0010540 basipetal auxin transport BP
GO:0010646 regulation of cell communication BP
GO:0010817 regulation of hormone levels BP
GO:0010928 regulation of auxin mediated signaling pathway BP
GO:0015238 xenobiotic transmembrane transporter activity MF
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015562 efflux transmembrane transporter activity MF
GO:0015893 xenobiotic transport BP
GO:0016020 membrane CC
GO:0016049 cell growth BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0021700 developmental maturation BP
GO:0022622 root system development BP
GO:0022804 active transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0023051 regulation of signaling BP
GO:0030054 cell junction CC
GO:0030154 cell differentiation BP
GO:0031090 organelle membrane CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0040007 growth BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042623 ATP hydrolysis activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0042908 xenobiotic transport BP
GO:0042910 xenobiotic transmembrane transporter activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048364 root development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048583 regulation of response to stimulus BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048767 root hair elongation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055044 symplast CC
GO:0055085 transmembrane transport BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0060918 auxin transport BP
GO:0060919 auxin import into cell BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071695 anatomical structure maturation BP
GO:0071944 cell periphery CC
GO:0080147 root hair cell development BP
GO:0080161 auxin transmembrane transporter activity MF
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:0099402 plant organ development BP
GO:1905392 plant organ morphogenesis BP
KEGG Term Name Description
map02010 ABC transporters The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).