Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
ACNE_24346.g
View in Genome Browser
Position
acne_103:20933219-20936005 (-)
2786bp
Gene Type
gene
Gene Description (Protein Product)
photo-lyase
Organism
Acer negundo
Also AS AT1G12370

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_25531.g Cryptochrome DASH, chloroplastic
ACNE_28565.g DNA repair helicase
ACNE_28625.g Histone-lysine N-methyltransferase
Regulatory gene
ACNE_01136.g dof zinc finger protein
ACNE_03642.g dof zinc finger protein
ACNE_07373.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0000719 photoreactive repair BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003904 deoxyribodipyrimidine photo-lyase activity MF
GO:0003913 DNA photolyase activity MF
GO:0005488 binding MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006281 DNA repair BP
GO:0006290 pyrimidine dimer repair BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009650 UV protection BP
GO:0009987 cellular process BP
GO:0016829 lyase activity MF
GO:0016830 carbon-carbon lyase activity MF
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0036094 small molecule binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0050660 flavin adenine dinucleotide binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071949 FAD binding MF
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0140097 catalytic activity, acting on DNA MF
GO:1901265 nucleoside phosphate binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF