PPGR - Gene Detail

Basic Information

Gene ID	ACNE_25421.g View in Genome Browser
Position	acne_101:25299113-25300070 (-) 957bp
Gene Type	gene
Gene Description (Protein Product)	Cytochrome c-type biogenesis protein
Organism	Acer negundo
Also AS	AT1G15220

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

ACNE_29183.g sulfhydryl oxidase

ACNE_26159.g Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit

ACNE_29743.g NADH dehydrogenase (quinone) activity

Regulatory gene

ACNE_01136.g dof zinc finger protein

ACNE_03642.g dof zinc finger protein

ACNE_05948.g MADS-box protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005740	mitochondrial envelope	CC
GO:0005743	mitochondrial inner membrane	CC
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009790	embryo development	BP
GO:0009791	post-embryonic development	BP
GO:0009793	embryo development ending in seed dormancy	BP
GO:0009987	cellular process	BP
GO:0010154	fruit development	BP
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016491	oxidoreductase activity	MF
GO:0017004	cytochrome complex assembly	BP
GO:0019866	organelle inner membrane	CC
GO:0022414	reproductive process	BP
GO:0022607	cellular component assembly	BP
GO:0031090	organelle membrane	CC
GO:0031966	mitochondrial membrane	CC
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0034622	protein-containing complex assembly	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044429	obsolete mitochondrial part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048316	seed development	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0061458	reproductive system development	BP
GO:0065003	protein-containing complex assembly	BP
GO:0071840	cellular component organization or biogenesis	BP