Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
ACNE_27900.g
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Position
acne_102:16976389-16980050 (-)
3661bp
Gene Type
gene
Gene Description (Protein Product)
Transcription elongation factor (TFIIS) family protein
Organism
Acer negundo
Also AS AT1G32130

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_29867.g Belongs to the SKP1 family
ACNE_28565.g DNA repair helicase
ACNE_28625.g Histone-lysine N-methyltransferase
Regulatory gene
ACNE_01136.g dof zinc finger protein
ACNE_03642.g dof zinc finger protein
ACNE_07212.g myb family transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000414 regulation of histone H3-K36 methylation BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009741 response to brassinosteroid BP
GO:0009742 brassinosteroid mediated signaling pathway BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010793 regulation of mRNA export from nucleus BP
GO:0014070 response to organic cyclic compound BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0023052 signaling BP
GO:0031056 regulation of histone modification BP
GO:0031060 regulation of histone methylation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031399 regulation of protein modification process BP
GO:0032239 regulation of nucleobase-containing compound transport BP
GO:0032268 regulation of protein metabolic process BP
GO:0032386 regulation of intracellular transport BP
GO:0032784 regulation of DNA-templated transcription elongation BP
GO:0032870 cellular response to hormone stimulus BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0033043 regulation of organelle organization BP
GO:0033044 regulation of chromosome organization BP
GO:0033157 regulation of intracellular protein transport BP
GO:0033993 response to lipid BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043401 steroid hormone mediated signaling pathway BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046822 regulation of nucleocytoplasmic transport BP
GO:0046825 regulation of protein export from nucleus BP
GO:0046831 regulation of RNA export from nucleus BP
GO:0048545 response to steroid hormone BP
GO:0050684 regulation of mRNA processing BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051223 regulation of protein transport BP
GO:0051246 regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060341 regulation of cellular localization BP
GO:0065007 biological regulation BP
GO:0070201 regulation of establishment of protein localization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071367 cellular response to brassinosteroid stimulus BP
GO:0071383 cellular response to steroid hormone stimulus BP
GO:0071396 cellular response to lipid BP
GO:0071407 cellular response to organic cyclic compound BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0080090 regulation of primary metabolic process BP
GO:0090087 regulation of peptide transport BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902275 regulation of chromatin organization BP
GO:1903311 regulation of mRNA metabolic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903827 regulation of protein localization BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000197 regulation of ribonucleoprotein complex localization BP
GO:2001141 regulation of RNA biosynthetic process BP
GO:2001253 regulation of histone H3-K36 trimethylation BP