Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
ACNE_28073.g
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Position
acne_102:1532816-1538789 (+)
5973bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear pore complex protein
Organism
Acer negundo
Also AS AT2G05120

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_29159.g Nuclear pore complex protein
ACNE_28470.g Nsp1-like C-terminal region
ACNE_29415.g Nuclear pore complex protein
Regulatory gene
ACNE_00566.g Protein SENSITIVE TO PROTON RHIZOTOXICITY
ACNE_00864.g radialis-like
ACNE_01136.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.