Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
ACNE_28350.g
View in Genome Browser
Position
acne_001:11315841-11322026 (-)
6185bp
Gene Type
gene
Gene Description (Protein Product)
Biotin--protein ligase
Organism
Acer negundo
Also AS AT2G25710

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACNE_29409.g Nicotinate
ACNE_29509.g Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
ACNE_29462.g Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions
Regulatory gene
ACNE_01136.g dof zinc finger protein
ACNE_03642.g dof zinc finger protein
ACNE_05948.g MADS-box protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000785 chromatin CC
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity MF
GO:0004078 biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity MF
GO:0004080 biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005652 nuclear lamina CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007584 response to nutrient BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008283 cell population proliferation BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009305 obsolete protein biotinylation BP
GO:0009374 biotin binding MF
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010243 response to organonitrogen compound BP
GO:0014070 response to organic cyclic compound BP
GO:0016043 cellular component organization BP
GO:0016363 nuclear matrix CC
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016874 ligase activity MF
GO:0016879 ligase activity, forming carbon-nitrogen bonds MF
GO:0018271 biotin-protein ligase activity MF
GO:0019538 protein metabolic process BP
GO:0019842 vitamin binding MF
GO:0019899 enzyme binding MF
GO:0031406 carboxylic acid binding MF
GO:0031667 response to nutrient levels BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0033218 amide binding MF
GO:0033273 response to vitamin BP
GO:0033293 monocarboxylic acid binding MF
GO:0034399 nuclear periphery CC
GO:0036094 small molecule binding MF
GO:0036211 protein modification process BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0042966 biotin carboxyl carrier protein biosynthetic process BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043177 organic acid binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0048037 obsolete cofactor binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0051276 chromosome organization BP
GO:0070013 intracellular organelle lumen CC
GO:0070781 response to biotin BP
GO:0071110 obsolete histone biotinylation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:0140096 catalytic activity, acting on a protein MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901681 sulfur compound binding MF
GO:1901698 response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00780 Biotin metabolism -