PPGR - Gene Detail

Basic Information

Gene ID	gene-Apse004G0206300 View in Genome Browser
Position	GWHBECT00000004:40653556-40664288 (-) 10732bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the CGI121 TPRKB family
Organism	Acer pseudosieboldianum
Also AS	AT4G34412

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-Apse009G0035000 Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction; but requires other protein(s) of the complex to fulfill this activity

gene-Apse009G0084700 Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction; but requires other protein(s) of the complex to fulfill this activity

gene-Apse005G0015100 Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction; but requires other protein(s) of the complex to fulfill this activity

Regulatory gene

gene-Apse001G0008900 Transcription factor

gene-Apse001G0076200 tesmin tso1-like cxc

gene-Apse001G0093000 Transcriptional regulator

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

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