Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-Apse006G0068600
View in Genome Browser
Position
GWHBECT00000006:9251456-9252801 (+)
1345bp
Gene Type
gene
Gene Description (Protein Product)
RNA recognition motif
Organism
Acer pseudosieboldianum
Also AS AT4G35785

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-Apse007G0065900 splicing factor
gene-Apse012G0132800 Serine arginine-rich splicing factor
gene-Apse012G0005600 Serine arginine-rich splicing factor
Regulatory gene
gene-Apse001G0228600 NAC domain-containing protein
gene-Apse001G0231200 NAC domain-containing protein
gene-Apse001G0263900 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.