Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-Apse007G0037700
View in Genome Browser
Position
GWHBECT00000007:18347402-18350322 (-)
2920bp
Gene Type
gene
Gene Description (Protein Product)
tryptophan synthase beta chain
Organism
Acer pseudosieboldianum
Also AS AT5G38530

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-Apse013G0022600 lactoylglutathione
gene-Apse011G0042900 Serine racemase
gene-Apse010G0115400 Interconversion of serine and glycine
Regulatory gene
gene-Apse001G0043100 zinc finger CCCH domain-containing protein
gene-Apse001G0124400 Myb family transcription factor
gene-Apse001G0186100 Zinc finger CCCH domain-containing protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].