Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-Apse007G0150800
View in Genome Browser
Position
GWHBECT00000007:37802532-37805210 (+)
2678bp
Gene Type
gene
Gene Description (Protein Product)
Protein SCO1 homolog 1
Organism
Acer pseudosieboldianum
Also AS AT3G08950

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-Apse011G0110700 Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step; the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites; respectively. Catalyzes the coordinated movement of the two tRNA molecules; the mRNA and conformational changes in the ribosome
gene-Apse013G0149800 Cytochrome c6
gene-Apse011G0128700 ATP-dependent Clp protease proteolytic
Regulatory gene
gene-Apse004G0242000 Protein BASIC PENTACYSTEINE4-like
gene-Apse004G0246200 Protein BASIC PENTACYSTEINE4-like
gene-Apse008G0138600 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008535 respiratory chain complex IV assembly BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0016043 cellular component organization BP
GO:0017004 cytochrome complex assembly BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033108 mitochondrial respiratory chain complex assembly BP
GO:0033617 mitochondrial cytochrome c oxidase assembly BP
GO:0034622 protein-containing complex assembly BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP